Information for 12-CTGCGCACGGAGA (Motif 30)

A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C A C T G A G C T A C T G A G T C A C T G A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 18.9bp
Average Position of motif in Background43.8 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGCACGGAGA
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGCGCACGGAGA
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGCGCACGGAGA
NCGCGGACGTTG-
 A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGCGCACGGAGA
GCGCCTGCGCA------
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGCGCACGGAGA
GCCGCGCAGTGCGT
 A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGCGCACGGAGA-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTGCGCACGGAGA
---BGCACGTA--
 A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTGCGCACGGAGA-----
---NNNACCGAGAGTNNN
 A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTGCGCACGGAGA-----
---GNNACCGAGAATNNN
 A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTGCGCACGGAGA
GCTGTG--------
 A C G T A G T C A C G T A C T G A G T C A C T G G T A C C T G A A G T C T C A G A C T G C G T A A C T G C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T