Information for 2-CMAGGGCCAAGCTGGS (Motif 2)

A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
Reverse Opposite:
A T C G G T A C A G T C C G T A A C T G G T A C A C G T C G A T A C T G A C T G A G T C G T A C A G T C A G C T A C G T A C T G
p-value:1e-13
log p-value:-3.207e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 31.0bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS---
-------CAAGATGGCGGC
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS---
-------CAAGATGGCGGC
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
---AGGCCTAG-----
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
--CGTGCCAAG-----
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS-
--GGGGCTYGKCTGGGA
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
--GGTGCCAAGT----
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
-----NAACAGCTGG-
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
----NNVVCAGCTGBN
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CMAGGGCCAAGCTGGS
----VNAVCAGCTGGC
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CMAGGGCCAAGCTGGS
----TGCCAA------
 A G T C G T A C C T G A A C T G A C T G A C T G G T A C G T A C C G T A C G T A A C T G G T A C A C G T A C T G A C T G A T C G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T