Information for 13-GCTTGCTGCCAYCWTC (Motif 19)

A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
Reverse Opposite:
C T A G T G C A G C T A A C T G T C G A C A G T A C T G A T C G A G T C C G T A A C T G A T G C C T G A T G C A T C A G A G T C
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.729
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.6 +/- 28.9bp
Average Position of motif in Background44.7 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGCTGCCAYCWTC
TTGGCATGGTGCCA-----
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTTGCTGCCAYCWTC
-----CTGCCCGCA--
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCTTGCTGCCAYCWTC
----GCCGCCATCTTG
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCTTGCTGCCAYCWTC
CTGGCAGNCTGCCA-----
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCTTGCTGCCAYCWTC
----SCTGTCARCACC
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCTTGCTGCCAYCWTC
---TGCTGACTCA---
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

BATF3/MA0835.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCTTGCTGCCAYCWTC-
---TGATGACGTCATCA
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C A C G T
A C G T A C G T A C G T G A C T C T A G T C G A C G A T A C T G C G T A G T A C C T A G A C G T G T A C C G T A A G C T G T A C C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGCTGCCAYCWTC
CACTTCCTGT-------
 A C G T A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCTTGCTGCCAYCWTC
----GCNGCCATCTTG
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCTTGCTGCCAYCWTC
-----ATGCCAACC--
 A C T G A G T C A C G T A G C T A T C G A G T C C G A T A C T G A T G C A G T C G C T A A G C T A G T C C G A T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T