Information for 6-ATGGARGTRACYT (Motif 9)

C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A C T A G A C T G A C G T A G T C C T G A A G T C A G C T G A C T A G T C A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 21.7bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ATGGARGTRACYT-
------GTGACCTT
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGGARGTRACYT
AACAAGGAAGTAA---
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGGARGTRACYT--
AGGGAAGTCATTTCT
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGGARGTRACYT
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATGGARGTRACYT---
------NTGACCTTGA
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:ATGGARGTRACYT--
-------TGACCTYA
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGGARGTRACYT------
---NNNGTGACCTTTGNNN
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ATGGARGTRACYT----
-------TGACCTTGAT
 C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGGARGTRACYT
AGCGGAAGTG----
 A C G T C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGGARGTRACYT
TAATGGCGGNC----
 A C G T A C G T C G T A A C G T A C T G A C T G C T G A C T G A A C T G A G C T C T A G C G T A A G T C A G T C A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T