Information for 4-TGCYCAAGGSCYR (Motif 7)

A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
Reverse Opposite:
A G C T C T A G A C T G A T C G A G T C G T A C A C G T A C G T A C T G C T G A A C T G A T G C G T C A
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif56.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets59.9 +/- 24.6bp
Average Position of motif in Background50.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TGCYCAAGGSCYR
--NTCAAGGTCA-
 A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGCYCAAGGSCYR
CCGCCCAAGGGCAG
 A C G T A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCYCAAGGSCYR-
AAGTTCAAGGTCAGC
 A C G T A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGCYCAAGGSCYR
--BTCAAGGTCA-
 A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGCYCAAGGSCYR-
----CAAGGHCANV
 A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCYCAAGGSCYR
NTGCCCTAGGGCAA
 A C G T A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGCYCAAGGSCYR
----CTAGGCCT-
 A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGCYCAAGGSCYR
NNTTTGCACACGGCCC-
 A C G T A C G T A C G T A C G T A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGCYCAAGGSCYR
GGGTGTGCCCAAAAGG--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCYCAAGGSCYR
TGCCCCAGGGCA-
 A C G T A T C G G T A C A G C T A G T C G T C A C G T A A C T G A C T G A T G C A G T C A G T C C T G A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T