Information for 10-TTTTAGGGACCTC (Motif 19)

A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T C G T A C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.943e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 27.1bp
Average Position of motif in Background66.9 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTAGGGACCTC
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGGGACCTC
NGANTTTTATGGCTCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTAGGGACCTC
ANTAATTTTATGGCCGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTTAGGGACCTC
CCTTTTATAGNC---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTTTAGGGACCTC
CAAATTCCGGAACC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTAGGGACCTC
NTNAATTTTATTGNATT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAGGGACCTC
DGWTTTATGRCN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAGGGACCTC---
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGGGACCTC
NGCTTTCTAGGAAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTTAGGGACCTC
TTTAATTGCN---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T