Information for 4-AGGGCTGCAT (Motif 11)

C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
Reverse Opposite:
G T C A C A G T A C T G A G T C C G T A A T C G T G A C G T A C G A T C A C G T
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.840
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif211.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets51.9 +/- 24.9bp
Average Position of motif in Background52.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGCTGCAT
AGGCCTNG--
 C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGGCTGCAT
--NGCTN---
 C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGCTGCAT
NNNANTGA--
 C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTGCAT
CTAGGCCT----
 A C G T A C G T C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTGCAT------
AAAATATGCATAATAAA
 A C G T C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGGCTGCAT----
AATCGCACTGCATTCCG
 A C G T A C G T A C G T C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGGCTGCAT
---GCTTCC-
 C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCTGCAT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGGCTGCAT--
GGGATTGCATNN
 C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGGGCTGCAT
CAAGATGGCGGC--
 A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G A T G C A C G T A C T G A G T C G T C A C A G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T