Information for 7-ATGTCCCCATGTAGAC (Motif 27)

C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
Reverse Opposite:
A T C G C G A T G T A C A G C T G T C A A G T C T C G A A C G T A C T G C T A G A C T G A C T G C G T A A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.175e+01
Information Content per bp:1.893
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 23.5bp
Average Position of motif in Background41.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
---TCCCCA-------
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
-TGWCCTCARNTGACC
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATGTCCCCATGTAGAC
TGTCGTGACCCCTTAAT---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
-KGTTGCCATGGCAAC
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A C G T A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCCCCATGTAGAC
NTNTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
-TGACCTYA-------
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
--GTTGCCATGGNAAC
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ATGTCCCCATGTAGAC
TTATGTACTAATAA----
 A C G T A C G T C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATGTCCCCATGTAGAC-
-CGTTGCCATGGCAACG
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C A C G T
A C G T A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGTCCCCATGTAGAC
ATGACATCATCNN---
 C G T A A C G T A C T G A C G T A G T C A G T C A G T C A G T C C G T A A C G T C T A G A C G T C T G A A C T G C G T A A T G C
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T A C G T A C G T