Information for 9-GGCGCTAAGGGAG (Motif 21)

A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G A G T C A C T G A G T C A G T C
p-value:1e-7
log p-value:-1.645e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 9.7bp
Average Position of motif in Background86.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCTAAGGGAG
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCTAAGGGAG
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGCGCTAAGGGAG
----CTAATKGV-
 A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCGCTAAGGGAG
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCGCTAAGGGAG
GGGGCCCAAGGGGG
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGCTAAGGGAG---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGCGCTAAGGGAG
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAAGGGAG
RGGGCACTAACY---
 A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCGCTAAGGGAG
GGGCGGGAAGG---
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCGCTAAGGGAG
CWGGCGGGAA-----
 A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T