Information for 8-CTCTGAAAGTGAG (Motif 19)

A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A A G T C A G C T A C G T A C G T A G T C C T G A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 18.9bp
Average Position of motif in Background64.0 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTCTGAAAGTGAG---
----GAAAGTGAAAGT
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCTGAAAGTGAG---
----GAAACTGAAACT
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCTGAAAGTGAG---
----GRAASTGAAAST
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTGAAAGTGAG
-ACTGAAACCA--
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTGAAAGTGAG--------
---GGAAAGCGAAACCAAAAC
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTGAAAGTGAG-----
---AGAAAGTGAAAGTGA
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCTGAAAGTGAG---
--ACGAAAGCGAAAGT
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGAAAGTGAG
GNCTATAAAAGG---
 A C G T A C G T A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTGAAAGTGAG
--CCGGAAGTGGC
 A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G
A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAAAGTGAG-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A G T C A C G T A G T C G A C T A C T G C G T A C G T A C T G A A C T G A C G T C T A G C G T A A C T G A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C