Information for 10-CCAGTGGAGTGGG (Motif 19)

A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A T G C A G C T G T A C A G T C C G T A A G T C A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.8 +/- 13.4bp
Average Position of motif in Background45.3 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCAGTGGAGTGGG-----
--TGCGGAGTGGGACTGG
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGGAGTGGG---
NNNANTGCAGTGCNNTT
 A C G T A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCAGTGGAGTGGG
---BTBRAGTGSN
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGTGGAGTGGG
---GTGGAT----
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCAGTGGAGTGGG-
----TTGAGTGSTT
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGTGGAGTGGG
NNTGTGGATTSS-
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCAGTGGAGTGGG
---NTCAAGTGG-
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCAGTGGAGTGGG----
-----NGCGTGGGCGGR
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCAGTGGAGTGGG
---CTYRAGTGSY
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGTGGAGTGGG-
----TTRAGTGSYK
 A G T C A G T C C G T A A C T G C G A T A C T G A C T G C T G A A T C G A C G T A C T G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T