Information for 1-GCCTAGGGTA (Motif 4)

C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A
Reverse Opposite:
G C A T T G C A A G T C A G T C A T G C A C G T C G T A A C T G A C T G G A T C
p-value:1e-13
log p-value:-3.126e+01
Information Content per bp:1.799
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif134.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets51.4 +/- 26.1bp
Average Position of motif in Background50.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTA
TGCCTGAGGCN
 A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTA
NGCCTGAGGCN
 A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGGGTA
NGCCTNAGGCN
 A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCTAGGGTA--
GGCACCCAGGGGTGC
 A C G T A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGGGTA--
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGGGTA
AGGCCTAG----
 A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGGGTA--
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCCTAGGGTA-
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGGGTA--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCCTAGGGTA-----
----AGGGTAACAGC
 C T A G G T A C A G T C G C A T C G T A A T C G C T A G T C A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C