Information for 1-CCGCGCAGGTCTC (Motif 1)

A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A A C T G C T G A A T G C A G T C C G A T A C T G A G T C A C T G A G T C C T A G A T C G
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.867
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.7 +/- 19.5bp
Average Position of motif in Background73.4 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCAGGTCTC
GCCGCGCAGTGCGT
 A C G T A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC-
--SDGCAGGTGCNS
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCGCGCAGGTCTC
---AACAGGTGT-
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC
-TGCGCAGGCGC-
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC
---NNCAGGTGNN
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC
---NNCAGGTGTN
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCGCGCAGGTCTC-
----VCAGGTRDRY
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC
---GACAGGTGTN
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGCGCAGGTCTC
---NNCAGGTGCG
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCGCGCAGGTCTC-----
------AGGTCTCTAACC
 A T G C A G T C A C T G A G T C A C T G A G T C C G T A A C T G A T C G A G C T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C