Information for 3-GAGGTCGAGG (Motif 12)

A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A G T C A T C G T C G A A T G C G A T C A C G T A T G C
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.806
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif532.9
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets53.2 +/- 26.0bp
Average Position of motif in Background50.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGGTCGAGG
GAGSCCGAGC
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGTCGAGG---
-AGGTCAAGGTCA
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGGTCGAGG---
-AGGTCAAGGTCA
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGGTCGAGG----
CAGGCCNNGGCCNN
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGTCGAGG--
GTGGGGGAGGGG
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTCGAGG---
GGCGGGGGCGGGGG
 A C G T A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGGTCGAGG
--GGGGGGGG
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGTCGAGG-----
AAGTTCAAGGTCAGC
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGGTCGAGG
---GTGGAT-
 A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTCGAGG----
NNAGGGGCGGGGTNNA
 A C G T A C G T A T C G G T C A C T A G A T C G A G C T A T G C C T A G C T G A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A