Information for 7-CTGCAGGTTGGTT (Motif 9)

T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
Reverse Opposite:
T G C A T C G A G T A C T A G C T G C A T G C A T A G C T A G C C G A T C T A G A T G C C T G A A T C G
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.680
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif340.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets46.3 +/- 23.3bp
Average Position of motif in Background47.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGCAGGTTGGTT
SDGCAGGTGCNS-
 T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGCAGGTTGGTT
---CAGGTGAGG-
 T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGGTTGGTT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGGTT
-NNCAGGTGNN--
 T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGGTTGGTT
CACAGCAGGGGG---
 A C G T A C G T T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTGCAGGTTGGTT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGGTTGGTT
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGGTTGGTT-
CAATGCATTGTGGGTA
 A C G T A C G T T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGGTT
-NNCAGGTGCG--
 T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCAGGTTGGTT
-NNCAGGTGTN--
 T A G C A G C T T A C G A G T C C G T A A T C G A T C G A C G T A C G T A C T G C A T G A G C T A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T