Information for 5-CCAGTGTSTSCCT (Motif 7)

A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
Reverse Opposite:
C G T A A C T G C T A G A T G C C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C T G C T A G
p-value:1e-10
log p-value:-2.429e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 19.0bp
Average Position of motif in Background44.5 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGTSTSCCT--
NNGCGTGTGTGCNGCN
 A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTGTSTSCCT
NNNCCATTGTGTNAN-
 A C G T A C G T A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGTSTSCCT
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAGTGTSTSCCT
CCATTGTTYB---
 A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAGTGTSTSCCT
NCCATTGTTY----
 A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCAGTGTSTSCCT--
CCATTGTATGCAAAT
 A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAGTGTSTSCCT
CCATTGTTTT---
 A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAGTGTSTSCCT
CCTTTGTT-----
 A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGTSTSCCT
CTCATTGTC-----
 A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCAGTGTSTSCCT
TGTTCCCATTGTGTACT-
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A C T A G A C G T A C T G A C G T A T C G A C G T A T C G A G T C G T A C A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T