Information for 9-TGATACACCATTG (Motif 16)

A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A A G C T A C T G A C T G A C G T A C T G A G C T T C G A A C G T A T G C C G T A
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.841
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 25.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANANGTGATACCCCATT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T A C G T

Six3/MA0631.1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANANGTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANANGTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANANNTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANNNATGATACCCCATC-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
ANANNTGATACCCNATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGATACACCATTG
NNGGTGACTCATCANN-
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGATACACCATTG
NATGAGTCACC----
 A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATACACCATTG
AATNTTGATACCCTATN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGATACACCATTG----
-------CCATTGTTYB
 A C G T A T C G G T C A A G C T C T G A A G T C C G T A A G T C A G T C C T G A C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G