Information for 7-AATMGACAGKCTT (Motif 6)

C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G G T A C A G T C A C G T A C T G A C G T A T G C A C G T C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.7 +/- 15.7bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATMGACAGKCTT
TCCAATCCACA-----
 A C G T A C G T A C G T C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATMGACAGKCTT
SSAATCCACANN---
 A C G T A C G T C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AATMGACAGKCTT
------CAAGCTT
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AATMGACAGKCTT
AACAATGTGCAGTGTT
 A C G T A C G T A C G T C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AATMGACAGKCTT
----CACAGN---
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AATMGACAGKCTT
--TTGACAGC---
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AATMGACAGKCTT
AATAAACAATN--
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AATMGACAGKCTT
--TTGACAGG---
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AATMGACAGKCTT--
NNATTGACAGGTGCTT
 A C G T C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AATMGACAGKCTT
AAACCACAGAN--
 C G T A G T C A A C G T G T A C A T C G C G T A A G T C C G T A C T A G A C G T A G T C A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T