Information for 4-GATAAGCCHGAGGTAA (Motif 5)

A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A
Reverse Opposite:
A C G T A G C T C T G A A G T C A T G C A G C T A G T C C G A T A C T G A C T G A T G C G A C T A C G T C G T A C G A T G T A C
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.766
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 15.9bp
Average Position of motif in Background63.6 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA-
--ATTGCCTGAGGCAAT
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA-
--ATTGCCTGAGGCGAA
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA-
--ATTCCCTGAGGGGAA
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA-
-----SCCTSAGGSCAW
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA
----AGCCTCAGGCA-
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA
----AGCCTCAGGCA-
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GATAAGCCHGAGGTAA-
--ANTGCCTGAGGCAAN
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GATAAGCCHGAGGTAA-
-----GCCTCAGGGCAT
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GATAAGCCHGAGGTAA
----NGCCTGAGGCN-
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GATAAGCCHGAGGTAA
--TAGGGCAAAGGTCA
 A C T G C G T A C G A T C G T A C T G A A T C G A G T C G T A C G C T A A C T G C T G A A T C G C T A G G A C T T C G A C G T A
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A