Information for 25-CTGGCTATCCAAC (Motif 44)

A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A G T C A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGGCTATCCAAC
GGTCTGGCAT------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTGGCTATCCAAC
TTGGCA-------
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CTGGCTATCCAAC
---RTTATGYAAB
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTATCCAAC
NTTGGCANN-----
 A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTGGCTATCCAAC
NCTGTCAATCAN--
 A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTGGCTATCCAAC--
---GYCATCMATCAT
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CTGGCTATCCAAC
--GHATATKCAT-
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCTATCCAAC---
NTNNCGTATCCAAGTNN
 A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:CTGGCTATCCAAC
GGGGATTTCC---
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CTGGCTATCCAAC
-TGTCTAGACG--
 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T