Information for 19-AAGGGTCAAA (Motif 42)

C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 18.2bp
Average Position of motif in Background46.3 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTCAAA--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AAGGGTCAAA--
CAAAGGTCAAGGG
 A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTCAAA---
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTCAAA---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGGGTCAAA
AGRGGTCA--
 C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGTCAAA
ANGNAAAGGTCA--
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAGGGTCAAA--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAGGGTCAAA
--AGGTCA--
 C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGTCAAA---
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGGGTCAAA-------
-GGGGTCAAAGTCCAAT
 C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T