Information for 23-GAGCTGGCTGCAAGGG (Motif 36)

T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
Reverse Opposite:
G A T C G T A C T G A C C G A T C G A T A T C G G T A C C T G A A C T G G T A C G T A C C G T A A T C G A G T C G A C T A G T C
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.669
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif159.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets50.0 +/- 20.3bp
Average Position of motif in Background56.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGCTGGCTGCAAGGG
---TWGTCTGV-----
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGCTGGCTGCAAGGG
---CTGTCTGG-----
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGCTGGCTGCAAGGG
-VBSYGTCTGG-----
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGCTGGCTGCAAGGG
CAAGATGGCGGC-----
 A C G T T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAGCTGGCTGCAAGGG
-----NGCTN------
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTGGCTGCAAGGG
NNTNNTGTCTGGNNTNG
 A C G T T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGCTGGCTGCAAGGG
CAAGATGGCGGC-----
 A C G T T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGCTGGCTGCAAGGG
---CWGGCGGGAA---
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGCTGGCTGCAAGGG--
-AGGACGCTGTAAAGGGA
 T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTGGCTGCAAGGG
AACAGATGGC--------
 A C G T A C G T T A C G C T G A A C T G T A G C G A C T A C T G A C T G A G T C A G C T A C T G A T G C G C T A C G T A A C T G A C T G C T A G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T