Information for 13-GCTATTTWTVKCC (Motif 28)

A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
Reverse Opposite:
C A T G A C T G T G C A A G C T C G T A C G A T C G T A C G T A C G T A C G A T C G T A C T A G T A G C
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.647
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif91.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets45.7 +/- 28.0bp
Average Position of motif in Background46.3 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GCTATTTWTVKCC
GCTATTTTTAGC-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GCTATTTWTVKCC
GCTATTTATAGC-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GCTATTTWTVKCC
GCTATTTTTGGM-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GCTATTTWTVKCC
KCTATTTTTRGH-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCTATTTWTVKCC
TCTATTTTTAGA-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCTATTTWTVKCC-
TTCTATTTTTAGNNN
 A C G T A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GCTATTTWTVKCC
TCTATTTATAGN-
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCTATTTWTVKCC
-CCATATATGG--
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCTATTTWTVKCC
-CTATTTTTGG--
 A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTATTTWTVKCC
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T G C T A C G A T G C A T G C A T C G T A A C G T T C G A A C G T T A G C G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T