Information for 11-GACHTGTCCAGAA (Motif 25)

A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C G C A T A C T G A C T G C G T A A G T C C G T A C G T A A C T G A C G T A T G C
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.1 +/- 24.0bp
Average Position of motif in Background45.8 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0104.1_Meis2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GACHTGTCCAGAA
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACHTGTCCAGAA
GAANNTTCTAGAA
 A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACHTGTCCAGAA
TAGAANVTTCTAGAA
 A C G T A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACHTGTCCAGAA
AATTACCTGTCAATAC
 A C G T A C G T A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACHTGTCCAGAA
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACHTGTCCAGAA
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACHTGTCCAGAA
GAANGTTCTAGAA
 A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACHTGTCCAGAA
GAACGTTCTAGAA
 A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACHTGTCCAGAA
GCACGTGTCNNNN-
 A C G T A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GACHTGTCCAGAA
--CCTGTCAA---
 A T C G G T C A G T A C G A C T A C G T A C T G A C G T A G T C A G T C C G T A C T A G C G T A C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T