Information for 1-RCAAGCCCAGACYTGT (Motif 2)

C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T
Reverse Opposite:
C T G A A G T C C T G A C T A G A C T G A G C T A G T C C G A T A C T G C T A G C T A G A G T C C G A T C G A T A C T G A G T C
p-value:1e-24
log p-value:-5.642e+01
Information Content per bp:1.786
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 20.8bp
Average Position of motif in Background65.7 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGCCCAGACYTGT---
RRCATGYCHGGACWTGYYYN
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---RCAAGCCCAGACYTGT-
NNNGCATGTCNNGACATGCN
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-RCAAGCCCAGACYTGT---
AACATGCCCAGACATGCCCN
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-RCAAGCCCAGACYTGT---
AACATGCCCAGACATGCCCN
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

TP53/MA0106.3/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-RCAAGCCCAGACYTGT-
AACATGCCCGGGCATGTC
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T
C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C

TP73/MA0861.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGCCCAGACYTGT-
GACATGTCNNGACATGTN
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:RCAAGCCCAGACYTGT
ACATGCCCGGGCAT--
 C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGCCCAGACYTGT-
GACATGTCCCAACATGTT
 A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T
C A T G C T G A A G T C C T G A G C A T A C T G G A C T G A T C T G A C A G T C C T G A C T G A A G T C C G T A G A C T A C T G G A C T G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RCAAGCCCAGACYTGT--
-CAAATCCAGACATCACA
 C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---RCAAGCCCAGACYTGT-
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A A C T G G A T C A G T C G T A C C G T A C T A G C T G A A G T C G A T C A G C T A C T G G A C T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T