Information for 8-TCAATCAATC (Motif 28)

A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C
Reverse Opposite:
T A C G T G C A A G C T A C G T C A T G G C T A C G A T A G C T A T C G T G C A
p-value:1e-8
log p-value:-1.901e+01
Information Content per bp:1.575
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif53.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.1 +/- 27.7bp
Average Position of motif in Background50.7 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-TCAATCAATC
HNRAATCAAT-
 A C G T A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TCAATCAATC-----
GAAGATCAATCACTAA
 A C G T A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TCAATCAATC
CCAATCAA--
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TCAATCAATC-----
GAAGATCAATCACTTA
 A C G T A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCAATCAATC---
-CCATCAATCAAA
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T A C G T A C G T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCAATCAATC--
GYCATCMATCAT
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCAATCAATC-
-DGATCRATAN
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCAATCAATC-
GCCATAAATCA
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCAATCAATC-
-TCATCAATCA
 A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T
A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCAATCAATC-
GGCCATAAATCA
 A C G T A C G T T A G C T C G A G C T A C G A T G T A C T G C A T C G A A C G T A T G C A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A