Information for 13-WGRMAAMGGCCAC (Motif 20)

C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A G C T A G T C C G T A
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.865
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 31.2bp
Average Position of motif in Background33.2 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--WGRMAAMGGCCAC
TAGGGCAAAGGTCA-
 A C G T A C G T C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WGRMAAMGGCCAC
ANGNAAAGGTCA-
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:WGRMAAMGGCCAC
---CAAAGGTCAG
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--WGRMAAMGGCCAC
TGGGGCAAAGGTCA-
 A C G T A C G T C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---WGRMAAMGGCCAC
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WGRMAAMGGCCAC---
TCTCAAAGGTCACCTG
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:WGRMAAMGGCCAC
-----AAGGTCAC
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:WGRMAAMGGCCAC---
GGCAAAAGTCCAATAA
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:WGRMAAMGGCCAC
---YAACBGCC--
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:WGRMAAMGGCCAC---
TCTCAAAGGTCACGAG
 C G A T A C T G C T A G G T C A C G T A C G T A T G A C A C T G A C T G A G T C A G T C C G T A A T G C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G