Information for 4-CTCCCTGRCA (Motif 16)

G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A
Reverse Opposite:
C G A T A C T G G A C T G T A C T G C A C T A G T C A G T A C G C G T A A C T G
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.496
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif760.2
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets47.7 +/- 24.1bp
Average Position of motif in Background47.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTCCCTGRCA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCTGRCA
CGCCCCCTGACA
 A C G T A C G T G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCCTGRCA---
CTGTCTGTCACCT
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCCCTGRCA--
--VGCTGWCAVB
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCCCTGRCA-
---CTTGGCAA
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCCCTGRCA--
----YTGWCADY
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTCCCTGRCA
CNGTCCTCCC-----
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTCCCTGRCA-
----TTGACAG
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCCCTGRCA
CTTCCNGGAA
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCCCTGRCA-
---GCTGTCAA
 G T A C G C A T A T G C A G T C G A T C A C G T C A T G C T G A T G A C G C T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A