Information for 3-CCGCGTCACA (Motif 15)

A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A
Reverse Opposite:
G A C T A C T G C G A T A C T G G T C A A G T C A T C G A G T C C T A G A C T G
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.856
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif78.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets58.8 +/- 24.7bp
Average Position of motif in Background42.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCGCGTCACA--
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

CREB3/MA0638.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGCGTCACA-
GTGCCACGTCATCA
 A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGCGTCACA
-TACGTCAT-
 A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCGCGTCACA----
----GTCACATGAY
 A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGCGTCACA
--ACGTCA--
 A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCGCGTCACA-
ATGCCACGTCATCA
 A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

XBP1/MA0844.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCGCGTCACA
AATGCCACGTCATC
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGCGTCACA-
---AGTCACGC
 A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGCGTCACA-
NTTATTCGTCATNC
 A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGCGTCACA--
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A T G C C T A G A C G T A G T C G C T A A G T C C T G A A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A