Information for 2-AGCAATCTTA (Motif 13)

C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
Reverse Opposite:
A C G T T G C A G C T A A T C G G T C A A G C T C G A T A T C G A G T C G C A T
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.677
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif256.2
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets44.4 +/- 26.0bp
Average Position of motif in Background48.8 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGCAATCTTA
--CAAGCTT-
 C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGCAATCTTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGCAATCTTA-
NNTNNCAATATTAG
 A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAATCTTA
AAGTCAGCANTTTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCAATCTTA---
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCAATCTTA--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCAATCTTA
GCNGCCATCTTG
 A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGCAATCTTA
HWWGTCAGCAWWTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCAATCTTA---
-GWAAYHTGAKMC
 C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCAATCTTA
CCATCAATCAAA
 A C G T A C G T C G T A C T A G A T G C C G T A T C G A C A G T T A G C C G A T A C G T T G C A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A