Information for 2-GGCCACAGCA (Motif 8)

A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
Reverse Opposite:
C G A T A T C G G A T C C G A T C T A G A C G T T A C G T C A G T G A C A G T C
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.813
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif434.5
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets47.1 +/- 24.2bp
Average Position of motif in Background50.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGCA-----
AATCGCACTGCATTCCG
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGCCACAGCA-----
---CACAGCAGGGGG
 A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCCACAGCA
---CACAGN-
 A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGCA
AAACCACAGAN
 A C G T A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCACAGCA-----
GAGCACAGCAGGACA
 A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCACAGCA--
GGCCACACCCAN
 A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A A C G T A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCCACAGCA-
-GCCACACCCA
 A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A A C G T
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGCA
AAACCACAGC-
 A C G T A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGCA
NWAACCACADNN
 A C G T A C G T A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCCACAGCA
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A T G C C G T A G A T C G C T A C T A G A T G C G C T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C