Information for 5-AACAAGCATGCTA (Motif 9)

C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C G T C A A C G T A C T G A T G C A C G T A C G T A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 33.4bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AACAAGCATGCTA
AAACAAACATTC--
 A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AACAAGCATGCTA
NNNTAACAATTATAN--
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACAAGCATGCTA
AACAAT-------
 C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AACAAGCATGCTA
GTAAACAAT-------
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AACAAGCATGCTA-----
------TATGCWAATBAV
 C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AACAAGCATGCTA
NAACAAT-------
 A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AACAAGCATGCTA
ATGTAAACADGS------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AACAAGCATGCTA
GTAAACAA--------
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AACAAGCATGCTA
--CAAGCTT----
 C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AACAAGCATGCTA
-CCAATCAA----
 C G T A C G T A A G T C C G T A T C G A A T C G A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T