Information for 9-CCAAGAGTTACAA (Motif 16)

A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
Reverse Opposite:
G C A T G A C T A T C G G A C T C G T A T C G A A G T C G A C T A G T C C A G T A C G T A T C G T A C G
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.666
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif117.3
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets57.1 +/- 25.7bp
Average Position of motif in Background52.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGAGTTACAA-
TGCCAAAATAAACANN
 A C G T A C G T A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAAGAGTTACAA--
GAAAAAATTGCAAGG
 A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCAAGAGTTACAA----
--AAAAATAACAAACGG
 A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAAGAGTTACAA
TTGACCGAGAATTCC--
 A C G T A C G T A C G T A C G T A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGAGTTACAA
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGAGTTACAA
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCAAGAGTTACAA
-NATGAGTCANN-
 A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CCAAGAGTTACAA---
------RNAACAATGG
 A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGAGTTACAA
TGCCAA---------
 A C G T A C G T A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCAAGAGTTACAA
-NATGAGTCACN-
 A T G C A T G C G T C A G C T A C T A G C T G A C T A G A G C T G C A T C T G A A T G C C G T A C G T A
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T