Information for 7-GAGGCCGCCAGAG (Motif 11)

A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A C G T A C T G A C T G A G T C A C T G A T C G A G T C A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 26.5bp
Average Position of motif in Background60.5 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGCCGCCAGAG
-AGCGCGCC----
 A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGCCGCCAGAG
GTGGGCCCCA---
 A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCGCCAGAG
CTAGGCCT------
 A C G T A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGGCCGCCAGAG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGGCCGCCAGAG-
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGGCCGCCAGAG--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGGCCGCCAGAG----
-NNNNTGCCAGTGATTG
 A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGGCCGCCAGAG
--GTCCGCCATTA
 A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAGGCCGCCAGAG--
AGGAGACCCCCAATTTG
 A C G T A C G T A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GAGGCCGCCAGAG----------
---GCCASCAGGGGGCGCYVNNG
 A C T G C G T A A C T G A C T G A T G C A G T C C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G