Information for 6-CAGCGAGTTTTCT (Motif 10)

A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A C T G A G T C A C G T A C T G
p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.951
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.6 +/- 28.3bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCGAGTTTTCT
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGAGTTTTCT
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCGAGTTTTCT----
GACAGAGATATCAGTGT
 A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGCGAGTTTTCT
CAGCC--------
 A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGCGAGTTTTCT
--GGGAATTTCC-
 A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAGCGAGTTTTCT
--GGGAATTTCC-
 A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CAGCGAGTTTTCT
HWWGTCAGCAWWTTT---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGAGTTTTCT
NGTCAGCANTTT----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGAGTTTTCT
AAGTCAGCANTTTTN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGAGTTTTCT
GTCAGCANNTN----
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G A T A C G T A C G T A C G T A G T C C G A T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T