Information for 15-CCTTTTAAGACTA (Motif 26)

T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
Reverse Opposite:
A G C T C T G A A C T G A C G T T G A C A C G T C A G T G T C A G C T A C G T A C G T A C T A G A C T G
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 14.8bp
Average Position of motif in Background47.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCTTTTAAGACTA
-----BCAGACWA
 T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PH0065.1_Hoxc10/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTAAGACTA--
ANNTTTTACGACNTNN
 A C G T T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTAAGACTA--
NNNTTTTACGACNTTN
 A C G T T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTTTTAAGACTA
-NTTTTACGACT-
 T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTAAGACTA--
NNGTTTTACGACTTTA
 A C G T T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTTTTAAGACTA
-NTTTTACGACC-
 T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTAAGACTA--
ANNATTTTACGACNTNA
 A C G T A C G T T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTTTTAAGACTA
-NTTTTACGACC-
 T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTAAGACTA--
NNNATTTTACGACNNTN
 A C G T A C G T T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTTTTAAGACTA
-NTTTTACGAC--
 T A G C A G T C C G A T A C G T C G A T A C G T G C T A C G T A A C T G C G T A A G T C A G C T C T G A
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T