Information for 8-GACSTGASYGTCCYWG (Motif 19)

A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T C T A G A C T G A C T G C G T A A G T C C T G A A T G C A C G T A G T C C G T A A T C G A C T G A C G T A G T C
p-value:1e-11
log p-value:-2.660e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 30.3bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACSTGASYGTCCYWG
GTGACGTCACCG------
 A C G T A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GACSTGASYGTCCYWG-
-------CTGTTCCTGG
 A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GACSTGASYGTCCYWG
--CTTGAGTGGCT---
 A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GACSTGASYGTCCYWG
GGGTACGTGC---------
 A C G T A C G T A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GACSTGASYGTCCYWG
TACGTGCV--------
 A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GACSTGASYGTCCYWG
NCGATGACGTCATCGN-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GACSTGASYGTCCYWG
NCACGTGACN-------
 A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GACSTGASYGTCCYWG
RTACGTGC---------
 A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GACSTGASYGTCCYWG
GGACGTGC---------
 A C G T A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GACSTGASYGTCCYWG
GVACAGNMTGTYCTB-
 A C T G C G T A A G T C A T G C A C G T A C T G C G T A T A C G G A C T A C T G A C G T A G T C A G T C A G T C C G T A A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T