Information for 4-CCTCAGGACACTG (Motif 4)

A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A C G T A C T G A C G T G T A C A G T C A C G T A C T G C T G A C T A G C T A G
p-value:1e-13
log p-value:-3.094e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.9 +/- 30.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGGACACTG
GCCTCAGGGCAT--
 A C G T A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTCAGGACACTG
SCCTSAGGSCAW--
 A C G T A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTCAGGACACTG
TCACCTCTGGGCAG--
 A C G T A C G T A C G T A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTCAGGACACTG
--TRAGGTCA---
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTCAGGACACTG----
---NAGGTCANTGACCT
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCTCAGGACACTG-
----AAAACAATGG
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTCAGGACACTG
---AAGGTCAC--
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCTCAGGACACTG--
------GACAATGNN
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTCAGGACACTG
-NACAGGAAAT--
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCTCAGGACACTG
-------ACAAAG
 A G T C A G T C A G C T A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G