Information for 14-ATGCATGTATCAT (Motif 19)

C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T
Reverse Opposite:
C G T A C G A T C A T G C G T A A G C T C G T A A G T C C G T A A C G T A C T G A G T C C G T A G A C T
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 22.9bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ATGCATGTATCAT-
---AATGTATCAAT
 C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATGCATGTATCAT
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATGCATGTATCAT
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCATGTATCAT-
AATATACATGTAAAATT
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGCATGTATCAT-
AAAATACATGTAATACT
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATGCATGTATCAT-
AAAATACATGTAAAAAT
 A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGCATGTATCAT
TCATGAATWATTCAT
 A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGCATGTATCAT
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGCATGTATCAT--
ATGCATWATGCATRW
 C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATGCATGTATCAT-
---CATGACTCATC
 C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A A C G T G A T C C G T A A C G T A C G T
A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C