Information for 12-CGGGCTAGAC (Motif 15)

A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C
Reverse Opposite:
A C T G A C G T A T G C A G C T T G C A A C T G A T G C G T A C A G T C A T C G
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.852
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif32.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets42.2 +/- 28.3bp
Average Position of motif in Background52.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGGCTAGAC-
-TGTCTAGACG
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGGCTAGAC-
AGGTGHCAGACA
 A C G T A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGGGCTAGAC--
----CCAGACAG
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCTAGAC--
AGGTGNCAGACAG
 A C G T A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CGGGCTAGAC----
----CCAGACRSVB
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGCTAGAC-
-GGGCGGGACC
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGGCTAGAC--
----BCAGACWA
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGCTAGAC
AGGCCTAG--
 A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGGGCTAGAC------
CAAATCCAGACATCACA
 A C G T A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCTAGAC--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A T G C A C T G A C T G A T C G G T A C A C G T C T G A A T C G C G T A A G T C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T