Information for 3-RTWGGGRYCTCMCGCR (Motif 11)

C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
Reverse Opposite:
A G T C C T A G A G T C A T C G A C G T A C T G C G T A A C T G C T A G A G C T A G T C A G T C A G T C C G A T C G T A A G T C
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 25.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR
---GGGGATTCCCCC-
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR
------NYTTCCCGCC
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR-
------NNTTCCCGCCC
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR
----------CACGCA
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RTWGGGRYCTCMCGCR---
-----GACCCCCCGCGAAG
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR
-NRRGGGTCTT-----
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR-
------NCTTCCCGCCC
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:RTWGGGRYCTCMCGCR-
-------TBGCACGCAA
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:RTWGGGRYCTCMCGCR
----GGACCACCCACG
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RTWGGGRYCTCMCGCR
---GGGGATTTCC---
 C T A G A C G T C G T A A C T G A C T G A C T G C T G A A G T C A G T C A C G T A G T C G T C A A T G C C T A G A G T C C T A G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T