Information for 25-ATATATATATATA (Motif 45)

C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A C G A T
p-value:1e-1
log p-value:-3.084e+00
Information Content per bp:1.939
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 1.4bp
Average Position of motif in Background46.1 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATATATA--
NANTTATATATAANGN
 A C G T C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:ATATATATATATA--
-TGTATATATATACC
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATATATATATATA-
YATGCATATRCATRT
 A C G T C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATATATATATATA----
ANNNGGATATATCCNNN
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATATATATATATA
-TATGTAAATAT-
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATATATATATATA
-TATGTAAATAT-
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATATATATATATA
CTCATGAATATTCAT-
 A C G T A C G T A C G T C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATATATATATATA------
----GTATAAAAGGCGGGG
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATATATATATATA------
----GTATAAAAGGCGGGG
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATATATATATATA----
ANTTNTACATGTANTTN
 C G T A C G A T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T