Information for 11-AKCGTTRACA (Motif 40)

C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A C G T A T G A C A C T G G T C A A C G T
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.901
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 24.6bp
Average Position of motif in Background38.1 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AKCGTTRACA-----
TGATTGTTAACAGTTGG
 A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

MYBL1/MA0776.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AKCGTTRACA--
ACCGTTAACGGT
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AKCGTTRACA--
----TTGACAGG
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AKCGTTRACA--
----TTGACAGC
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:AKCGTTRACA-
----TTGACAG
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AKCGTTRACA--
GGTGYTGACAGS
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AKCGTTRACA--
CAAACGTAAACAAT
 A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AKCGTTRACA--
----YTGWCADY
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

FOXO6/MA0849.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AKCGTTRACA
---GTAAACA
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A
A C G T A C G T A C G T C T A G C G A T T G C A G T C A C G T A A G T C C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AKCGTTRACA
--ARNTGACA
 C G T A A C G T A G T C A C T G A C G T A C G T C T A G C G T A A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A