Information for 9-ACAGGCTGGA (Motif 38)

G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A
Reverse Opposite:
A G C T A G T C A T G C T C G A T C A G T G A C G T A C G A C T A C T G C A G T
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.816
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif284.7
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets45.8 +/- 29.3bp
Average Position of motif in Background54.2 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACAGGCTGGA-
-CWGGCGGGAA
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACAGGCTGGA---
--GGGCGGGAAGG
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACAGGCTGGA---
---GGCGGGAARN
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACAGGCTGGA---
--GGGCGGGAAGG
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACAGGCTGGA----
--TGGCGGGAAAHB
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCTGGA
CACAGN-----
 A C G T G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACAGGCTGGA---
---GGCGGGAAAH
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACAGGCTGGA
-TWGTCTGV-
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGGCTGGA--
BTKGGCGGGAAA
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAGGCTGGA
-CTGTCTGG-
 G T C A T G A C C T G A C A T G A C T G A G T C A C G T A T C G A C T G T C G A
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T