Information for 7-AGCCAAGTAA (Motif 33)

C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T A C G T A T C G A C T G A G T C C G A T
p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.921
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif23.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.2 +/- 28.9bp
Average Position of motif in Background44.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAGTAA
AAGGCAAGTGT
 A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAGTAA---
ATGCCACGTCATCA
 A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCCAAGTAA---
AACAACCAATTAATTC
 A C G T A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCCAAGTAA
CGTGCCAAG---
 A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCAAGTAA
TGCCAA----
 C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCCAAGTAA---
CAAAACCAATTAATTT
 A C G T A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

CREB3/MA0638.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCAAGTAA---
GTGCCACGTCATCA
 A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCCAAGTAA---
AAAAACCAATTAAGAA
 A C G T A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCCAAGTAA----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCCAAGTAA
GGTGCCAAGT--
 A C G T A C G T C G T A A C T G A G T C A T G C C G T A G T C A A C T G A C G T C G T A C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T