Information for 2-AKTTCCTTGAAWGATG (Motif 3)

C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
Reverse Opposite:
A G T C G T C A A C G T A T G C G C A T A C G T A G C T G T A C G T C A C G T A T C A G A C T G C T G A G T C A G T C A C G A T
p-value:1e-16
log p-value:-3.759e+01
Information Content per bp:1.693
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.5 +/- 24.0bp
Average Position of motif in Background58.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AKTTCCTTGAAWGATG
-TTTCCTGGAAAGNNN
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AKTTCCTTGAAWGATG
-TTTCCTAGAAAGCA-
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AKTTCCTTGAAWGATG
NNNTTTCCTGGAAA----
 A C G T A C G T C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AKTTCCTTGAAWGATG
NNNATTCCTCGAAAGN--
 A C G T A C G T C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AKTTCCTTGAAWGATG
-TTTCCTGGAAA----
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AKTTCCTTGAAWGATG
NATTTCCNGGAAAT---
 A C G T C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AKTTCCTTGAAWGATG
-TTTCCNGGAAAN---
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AKTTCCTTGAAWGATG
ATTTCCAAGAA-----
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AKTTCCTTGAAWGATG
NTTTCTNAGAAA----
 C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AKTTCCTTGAAWGATG
NNCTTCCNGGAAGN---
 A C G T C G T A A C G T A C G T A G C T A G T C A G T C G C A T A C G T A C T G C T G A G T C A C G T A T A C G C G T A C A G T T C A G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T A C G T