Information for 15-CCCGAGBCAGCTTGAC (Motif 28)

A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
Reverse Opposite:
A C T G A C G T A T G C G T C A C T G A C T A G G T A C A C G T A T C G T A C G A G T C A C G T A T G C A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 20.3bp
Average Position of motif in Background51.7 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCCGAGBCAGCTTGAC
TCCCNNGGGACN-----
 A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCCGAGBCAGCTTGAC---
----GGTCANNGTGACCTN
 A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGBCAGCTTGAC
AGCCTCAGGCA-------
 A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCCGAGBCAGCTTGAC
CGCCCCCTGACA-------
 A C G T A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGBCAGCTTGAC
CGCCTCAGGCA-------
 A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCCGAGBCAGCTTGAC
--TCAGNGAGCGTGAC
 A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGBCAGCTTGAC
ATTCCCAAGGGAAT-----
 A C G T A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCGAGBCAGCTTGAC
TGCCTGCGYCMCCTT---
 A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCCGAGBCAGCTTGAC
NTNGCCTCAGGCNNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGBCAGCTTGAC
AGCCTCAGGCA-------
 A C G T A C G T A G T C A G T C G T A C A T C G G T C A A C T G A G T C A T G C C G T A A C T G A G T C A G C T A C G T A T C G G T C A A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T