Information for 13-TGYKSVCCARGCTRST (Motif 23)

C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
Reverse Opposite:
G C T A T A C G A G T C C G T A A T C G A G T C A G T C A G C T T A C G A T C G A T C G A T C G T G A C T C A G A G T C G C T A
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.622
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif44.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.5 +/- 21.1bp
Average Position of motif in Background51.9 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:TGYKSVCCARGCTRST
---------NGCTN--
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST
-------CAAGCTT--
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST
--CGCCTCAGGCA---
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGYKSVCCARGCTRST-
-------CCAGCTGTTN
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST
--AGCCTCAGGCA---
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST
--AGCCTCAGGCA---
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGYKSVCCARGCTRST
AAGGKGRCGCAGGCA---
 A C G T A C G T C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST
------CGCAGCTGCG
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TGYKSVCCARGCTRST-
-------NCAGCTGCTG
 C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TGYKSVCCARGCTRST---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T C G A T T A C G A G T C A C T G A T G C T A G C A T G C A T G C T C G A C T A G A C T G A T G C A C G T T C A G A T G C C G A T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A