p-value: | 1e-9 |
log p-value: | -2.245e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.04% |
Number of Background Sequences with motif | 15.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 63.6 +/- 24.8bp |
Average Position of motif in Background | 58.9 +/- 18.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCCAGGACAAGAC -TRAGGTCA---- |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCCAGGACAAGAC -CAAGGHCANV-- |
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AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCCAGGACAAGAC GCCTCAGGGCAT--- |
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Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCCAGGACAAGAC BTCAAGGTCA---- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCCAGGACAAGAC CAAAGGTCAG--- |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCCAGGACAAGAC NTCAAGGTCA---- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CCCAGGACAAGAC GGTCANYTGAGGWCA---- |
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Mecom/MA0029.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCAGGACAAGAC---- ---AAGATAAGATAACA |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCCAGGACAAGAC TCAAGGTCAN--- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCCAGGACAAGAC ---AGGTCA---- |
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