Information for 5-ACTGCACATT (Motif 13)

C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T
Reverse Opposite:
C G T A G C T A A C G T C T A G A C G T C T A G G T A C C G T A A C T G C G A T
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.830
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif145.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets47.9 +/- 26.1bp
Average Position of motif in Background51.4 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCACATT---
AACACTGCACATTGTT
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------ACTGCACATT-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGCACATT--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGCACATT--
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACTGCACATT-
ATTGCACAATA
 C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCACATT--
ATATGCAAATNNN
 A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTGCACATT
TCCAATCCACA--
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCACATT
GGGATTGCATNN-
 A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACTGCACATT
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCACATT
SSAATCCACANN
 A C G T A C G T C G T A G T A C C G A T A C T G A G T C C G T A G A T C G T C A C G A T G C A T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C